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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6950225_6952240_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6950225 - 6952240

Intron Length:

2016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

ACGCCTGCGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

TCCTCCACATCT

Flanking Amino Acid:

LAGLSLLLALVPPALGMEVM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

55.7

0.13

1.1

50.2

38.7

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

47.6

-0.1

2.1

69.01

47.4

Associated Gene:

Gene:

SCN2B

Ensembl Gene ID:

ENSAPLG00000011335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011789

6935335 - 6952341

17007