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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6960503_6960827_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6960503 - 6960827

Intron Length:

325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTCAG

5'SS Class:

major

3'SS Sequence:

TGTGTCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

TTCACCTGAAGC

Flanking Amino Acid:

LHVPGTGAQKEEMVFYYYSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

64.9

42.8

Major BPS

60.8

0.27

51.3

35.5

Major PPT

67.6

0.4

62.7

39.7

Minor 5ss

26.7

-2.7

2.9

30.9

43.2

Minor BPS

56.1

0.17

1.8

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011610

6958915 - 6970677

11763