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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6962789_6969639_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6962789 - 6969639

Intron Length:

6851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAG

U12 Branch Point Sequence:

TCTGCCTTCCTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

43.9

-0.3

1.6

36.8

44.4

Major PPT

80.5

0.69

0.7

72.9

31.9

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

41.3

-0.5

3.6

70.75

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011610

6958915 - 6970677

11763