Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_6979711_6980052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6979711 - 6980052

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGGACA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTAATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

EKTTEVSDTELREKEKLKIR

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

65.6

39.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

35.5

-1.7

3.2

45.2

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

MPZL2

Ensembl Gene ID:

ENSAPLG00000010883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011334

6977992 - 6983428

5437