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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6996503_6996821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6996503 - 6996821

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TGTAGCTCACCT

Flanking Amino Acid:

NLIANEQLYQPLGERDDGQY

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

0.28

1.1

63.1

35.8

Major PPT

82.9

0.74

0.6

82.3

22.3

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

46.4

-0.1

2.2

69.88

46.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033573

6996440 - 6998942

2503

ENSAPLT00000010996

6996440 - 6999407

2968