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Intron Name: Anas_platyrhynchos_platyrhynchos_25_6997656_6998266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6997656 - 6998266

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTGATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAT

U12 Branch Point Sequence:

CTCTCCTTGATT

Flanking Amino Acid:

SVAVAGLGVQGQMIIVKEKN

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

71.5

0.53

1.1

43.2

Major PPT

82.4

0.73

0.9

75.8

37.8

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

75.8

0.89

1.2

82.6

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033573

6996440 - 6998942

2503

ENSAPLT00000010996

6996440 - 6999407

2968