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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7010483_7011502_F


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
7010483 - 7011502

Intron Length:
1020

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAGGAATT

5'SS Class:
major

3'SS Sequence:
ATTTTCTTTGTAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCTAAC

U12 Branch Point Sequence:
TGAACCTTATTT

Flanking Amino Acid:
LLEATGSTDQCCIQLFYSVR

Intron Amino Acid Position:
507

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1
77.2
37.6

Major BPS
75.8
0.64
0.9
75.6
25.3

Major PPT
86
0.81
0.7
81.9
29.3

Minor 5ss
38.2
-1.3
3.4
54.4
44

Minor BPS
61.1
0.43
1.6
74.71
41.8

Associated Gene:

Gene:
ZW10

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6999325 - 7015392
16068