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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7017702_7017804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7017702 - 7017804

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGGGA

5'SS Class:

major

3'SS Sequence:

TGCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAG

U12 Branch Point Sequence:

CTATGTTCAGTC

Flanking Amino Acid:

YPQGKIDACQGDSGGPLVCQ

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.1

40.8

Major BPS

60.8

0.27

1.6

71.4

45.1

Major PPT

82.5

0.73

0.8

76.7

31.9

Minor 5ss

28.7

-2.4

3.5

46.8

Minor BPS

42.3

-0.6

50.77

40.9

Associated Gene:

Gene:

TMPRSS5

Ensembl Gene ID:

ENSAPLG00000019752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047768

7017432 - 7019621

2190

ENSAPLT00000042361

7017349 - 7019621

2273