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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7018258_7018609_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7018258 - 7018609

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

CGTCCCGGGACT

Flanking Amino Acid:

MKLHVPLNFSDAIRAVCLPP

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.8

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

0.45

0.9

62.6

33.2

Minor 5ss

44.3

-0.6

2.9

43.7

Minor BPS

46.3

-0.2

2.2

66.36

44.1

Associated Gene:

Gene:

TMPRSS5

Ensembl Gene ID:

ENSAPLG00000019752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047768

7017432 - 7019621

2190

ENSAPLT00000042361

7017349 - 7019621

2273