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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7018786_7018866_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7018786 - 7018866

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGGGG

5'SS Class:

major

3'SS Sequence:

GCCGTGCGCTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGGTGCTCAGGT

Flanking Amino Acid:

WILTAAHCLHSSRRLHGSGW

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

60.1

42.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

57.4

0.17

53.1

41.6

Minor 5ss

27.2

-2.6

3.7

37.3

47.4

Minor BPS

-0.5

2.3

60.77

48.4

Associated Gene:

Gene:

TMPRSS5

Ensembl Gene ID:

ENSAPLG00000019752

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047768

7017432 - 7019621

2190

ENSAPLT00000042361

7017349 - 7019621

2273