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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_7094049_7094690_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
7094049 - 7094690
Intron Length:
642

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGTTAT
5'SS Class:
strong_major
3'SS Sequence:
TTTTGTCTTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ACCAAAA
U12 Branch Point Sequence:
GAGACCAAAACT
Flanking Amino Acid:
CPLLFGLNTADDNECVIANP
Intron Amino Acid Position:
177

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
93.7
1.03
0.7
89.2
17.7
Major BPS
48.7
-0
1
53.2
28.8
Major PPT
89.2
0.88
0.7
81.2
36.5
Minor 5ss
36.4
-1.5
2.9
48.7
47.5
Minor BPS
47.3
-0.1
2
64.04
45.4

Associated Gene:

Gene:
DRD2
Ensembl Gene ID:
ENSAPLG00000009051
Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000031736
7089293 - 7097584
8292
ENSAPLT00000009445
7089293 - 7097584
8292