Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_7105_16886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7105 - 16886

Intron Length:

9782

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

CATTAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TATCCATTAATT

Flanking Amino Acid:

RHRHECLGLLEKCTGETVLS

Intron Amino Acid Position:

792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.6

48.1

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

78.1

0.63

0.9

Minor 5ss

-1.6

3.2

45.3

Minor BPS

0.71

1.5

84.43

35.5

Associated Gene:

Gene:

ANKMY1

Ensembl Gene ID:

ENSAPLG00000013399

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013963

6941 - 53344

46404