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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7140873_7142630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7140873 - 7142630

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

CTTTCTGTACAA

Flanking Amino Acid:

AQEEVVKSDKRFSVLLKLLD

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

73.6

37.1

Major BPS

60.3

0.26

65.5

Major PPT

80.2

0.68

0.8

74.8

33.6

Minor 5ss

34.7

-1.7

3.2

43.8

Minor BPS

46.3

-0.2

2.3

63.66

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008844

7139526 - 7156906

17381