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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7149940_7150980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7149940 - 7150980

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACGTTTCTAATT

Flanking Amino Acid:

SIINDNEVVRRGFCAERKHI

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

72.9

36.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

73.3

0.52

0.9

71.6

38.4

Minor 5ss

33.6

-1.9

3.5

49.7

46.1

Minor BPS

51.7

0.13

1.6

65.77

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008844

7139526 - 7156906

17381