Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_7151051_7151650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7151051 - 7151650

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

GAAATTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATCTCTGAAAT

Flanking Amino Acid:

IKALTGAVKDCTEQTLFRTN

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

75.3

33.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.8

0.54

69.8

45.3

Minor 5ss

35.5

-1.6

2.9

49.8

40.3

Minor BPS

60.4

0.4

1.5

77.17

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008844

7139526 - 7156906

17381