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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7166127_7168432_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7166127 - 7168432

Intron Length:

2306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTATGGCTG

5'SS Class:

weak_major

3'SS Sequence:

ATTTCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGTCTCTAAACT

Flanking Amino Acid:

SSVPAAPAKTEKTPVEDKSE

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.1

50.7

45.8

Major BPS

0.57

73.6

28.6

Major PPT

83.3

0.75

0.7

81.6

29.6

Minor 5ss

41.7

-0.9

3.3

52.1

45.7

Minor BPS

65.4

0.56

1.7

81.89

39.4

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047