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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7171755_7183848_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7171755 - 7183848

Intron Length:

12094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCGG

5'SS Class:

major

3'SS Sequence:

TTGGTCTCTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGGTCTCTAAAG

Flanking Amino Acid:

RTSAQPTVIPASTSPTSGLG

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

55.4

48.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.4

1.1

67.7

38.2

Minor 5ss

29.1

-2.4

3.4

38.7

46.4

Minor BPS

50.1

-0.1

1.9

58.17

43.2

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007333

7166006 - 7271052

105047

ENSAPLT00000034074

7166006 - 7271052

105047