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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7184030_7184508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7184030 - 7184508

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TGCTGTTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TGTTTTGCATCT

Flanking Amino Acid:

IRHYLIKYKAKHSSEWKPEI

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.3

73.1

43.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

0.65

0.9

72.9

37.4

Minor 5ss

41.2

-1

2.8

56.1

41.3

Minor BPS

43.9

-0.3

2.3

68.03

43.2

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047