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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7184637_7200953_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7184637 - 7200953

Intron Length:

16317

Sequence Information:

Terminal Dinucleotides:

GT-TT

5'SS Sequence:

TTC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCCACCATTGTTT|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTTCACAAAT

Flanking Amino Acid:

LPSDFKTQPVPGEPSAPKLE

Intron Amino Acid Position:

599

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

75.9

35.2

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

22.2

-1.6

4.1

47.1

35.1

Minor 5ss

36.6

-1.5

2.7

42.9

38.5

Minor BPS

56.6

0.29

1.9

82.57

38.1

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007333

7166006 - 7271052

105047

ENSAPLT00000034074

7166006 - 7271052

105047