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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7201086_7201261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7201086 - 7201261

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTTTCTGTAACA

Flanking Amino Acid:

WHSRLYDAKEANMEGTITIS

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

68.7

39.1

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

74.2

0.55

69.5

40.5

Minor 5ss

35.9

-1.6

3.3

47.3

48.1

Minor BPS

66.4

0.51

79.83

36.4

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047