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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7202336_7202689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7202336 - 7202689

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTTTTCTGATCC

Flanking Amino Acid:

YNTPSASYLEVTPDSENDFG

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.74

0.8

76.9

31.2

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

0.26

1.7

71.83

39.1

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007333

7166006 - 7271052

105047

ENSAPLT00000034074

7166006 - 7271052

105047