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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7202875_7203443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7202875 - 7203443

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGAAGG

5'SS Class:

major

3'SS Sequence:

ATGTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCATAT

U12 Branch Point Sequence:

ATTGCCTTCACG

Flanking Amino Acid:

DSQAMYLEVQYAPKLQGPVA

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

59.3

45.3

Major BPS

61.9

0.3

1.1

58.6

38.7

Major PPT

84.2

0.77

0.8

81.7

35.4

Minor 5ss

34.9

-1.7

41.5

44.6

Minor BPS

61.8

0.23

69.5

43.9

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007333

7166006 - 7271052

105047

ENSAPLT00000034074

7166006 - 7271052

105047