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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7212319_7212530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7212319 - 7212530

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

TTCTCCCCAACA

Flanking Amino Acid:

GFPEPTMTWTKDGEPIEPED

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

74.9

29.1

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

77.2

0.61

0.9

70.4

36.3

Minor 5ss

39.9

-1.1

3.1

39.9

Minor BPS

61.4

0.35

1.9

76.63

40.3

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047