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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7212649_7213139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7212649 - 7213139

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

CCCTTGCTAACT

Flanking Amino Acid:

NFKDIQVIVNVPPSVRARQS

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

84.8

0.78

0.7

76.5

32.1

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

45.5

-0.2

2.3

63.18

47.3

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007333

7166006 - 7271052

105047

ENSAPLT00000034074

7166006 - 7271052

105047