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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7213278_7214138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7213278 - 7214138

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

CTTGGATGAACT

Flanking Amino Acid:

KGRDVILKKDVRFIVLSNNY

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

60.5

44.3

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

88.2

0.86

0.6

81.7

30.3

Minor 5ss

31.2

-2.1

3.3

38.8

40.9

Minor BPS

46.5

-0.1

2.2

69.74

46.7

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047