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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7215241_7216768_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7215241 - 7216768

Intron Length:

1528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTGTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTTTTGTTATT

Flanking Amino Acid:

VGESKFFLCQVAGEAKYKDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.4

0.53

0.9

66.3

40.5

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

49.6

0.05

2.2

78.47

38.5

Associated Gene:

Gene:

NCAM1

Ensembl Gene ID:

ENSAPLG00000006972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034074

7166006 - 7271052

105047

ENSAPLT00000007333

7166006 - 7271052

105047