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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7398355_7402948_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7398355 - 7402948

Intron Length:

4594

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCACTATGT

5'SS Class:

weak_major

3'SS Sequence:

TGGTGGGTGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

TCTAACTTACTG

Flanking Amino Acid:

QAKRELPLIKGLMNREVMPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.3

51.7

44.7

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

55.9

0.13

1.2

49.1

48.1

Minor 5ss

-2.3

4.3

47.1

46.2

Minor BPS

48.9

-0.2

1.9

56.74

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022074

7394774 - 7403014

8241