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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7566781_7567148_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7566781 - 7567148

Intron Length:

368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCATCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCTTTTCATC

Flanking Amino Acid:

ILSVVISPDENRSAFLLVLD

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.8

77.8

30.6

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

56.6

0.19

1.7

70.66

35.2

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028415

7566105 - 7609990

43886

ENSAPLT00000019449

7566667 - 7613733

47067

ENSAPLT00000006393

7566105 - 7586919

20815