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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7567260_7568263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7567260 - 7568263

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTGCACTTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTACTGCACT

Flanking Amino Acid:

KVDVETKNFKIWQEEGSYPS

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

36.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.25

54.2

41.1

Minor 5ss

30.7

-2.2

3.2

46.8

Minor BPS

53.2

0.18

2.1

79.08

42.4

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028415

7566105 - 7609990

43886

ENSAPLT00000019449

7566667 - 7613733

47067

ENSAPLT00000006393

7566105 - 7586919

20815