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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7572424_7572560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7572424 - 7572560

Intron Length:

137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

AATGCTCTGATG

Flanking Amino Acid:

KMKPSYYHSFGMSENYIIFI

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

77.2

37.6

Major BPS

0.72

38.9

Major PPT

80.2

0.68

0.8

76.5

32.1

Minor 5ss

37.2

-1.4

46.5

42.8

Minor BPS

45.9

-0.4

1.7

49.74

38.6

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028415

7566105 - 7609990

43886

ENSAPLT00000019449

7566667 - 7613733

47067

ENSAPLT00000006393

7566105 - 7586919

20815