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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7575872_7577912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7575872 - 7577912

Intron Length:

2041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

GGTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TAAGCTTAAACA

Flanking Amino Acid:

ERFMSRFDTPKPSDNASVSY

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

63.6

41.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.1

0.68

76.9

42.1

Minor 5ss

31.5

-2.1

3.4

38.7

40.8

Minor BPS

55.3

0.16

1.8

64.97

41.6

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028415

7566105 - 7609990

43886

ENSAPLT00000019449

7566667 - 7613733

47067

ENSAPLT00000006393

7566105 - 7586919

20815