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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7579430_7609129_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7579430 - 7609129

Intron Length:

29700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGTCCC

5'SS Class:

major

3'SS Sequence:

GCTTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTGTTGTCACT

Flanking Amino Acid:

IRGSHGQQGHGLKRSLPSPS

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

61.2

43.7

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

34.9

-1.7

3.1

46.2

41.9

Minor BPS

46.4

-0.2

2.4

74.22

43.6

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019449

7566667 - 7613733

47067