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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7611859_7612415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7611859 - 7612415

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTGGG

5'SS Class:

major

3'SS Sequence:

CTGCTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGCTTTTAATA

Flanking Amino Acid:

SMNVKPTCLTDGVTVAIKSY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

59.7

45.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

75.8

32.8

Minor 5ss

33.6

-1.9

45.3

Minor BPS

0.34

1.3

63.44

37.8

Associated Gene:

Gene:

BCO2

Ensembl Gene ID:

ENSAPLG00000006142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019449

7566667 - 7613733

47067