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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7622055_7622579_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7622055 - 7622579

Intron Length:
525

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTAAGGGCC

5'SS Class:
major

3'SS Sequence:
TTCTTCTGTTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAT

U12 Branch Point Sequence:
ATGGCTTTGATT

Flanking Amino Acid:
VPPPPPPPPPVATPAAAAPP

Intron Amino Acid Position:
313

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.46
1.1
62.7
37.9

Major BPS
71.2
0.53
1
70.3
31.9

Major PPT
73.4
0.53
1.1
79
33.3

Minor 5ss
32.7
-2
3.6
47.8
42

Minor BPS
61.2
0.43
1.4
72.25
39.7

Associated Gene:

Gene:
DLAT

Ensembl Gene ID:

Chromosome:
25

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7616992 - 7625880
8889