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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7627121_7629489_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7627121 - 7629489

Intron Length:

2369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGAAGAA

5'SS Class:

weak_major

3'SS Sequence:

AAGACCAGACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATCAG

U12 Branch Point Sequence:

TGGGCTGTATCA

Flanking Amino Acid:

PGWEGKIVAWTCFLGLSATN

Intron Amino Acid Position:

547

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.1

51.6

35.3

Major BPS

48.6

-0

1.7

59.7

46.7

Major PPT

43.3

-0.3

1.1

28.9

Minor 5ss

21.8

-3.2

3.3

19.1

38.1

Minor BPS

43.6

-0.4

2.2

55.11

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040602

7627058 - 7651201

24144