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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7629678_7633358_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7629678 - 7633358

Intron Length:

3681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGATGTTT

5'SS Class:

weak_major

3'SS Sequence:

GTGCCTCACTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AAAACCTGAATA

Flanking Amino Acid:

EALVYTSDCQRMRSIFGELR

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.1

62.1

38.9

Major BPS

81.6

0.78

0.8

24.9

Major PPT

47.4

-0.1

1.7

54.7

40.5

Minor 5ss

38.6

-1.3

3.5

45.9

Minor BPS

57.4

0.23

1.4

62.29

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005002

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040602

7627058 - 7651201

24144