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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7684698_7685068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7684698 - 7685068

Intron Length:

371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTATGTGCA

5'SS Class:

major

3'SS Sequence:

TTTCTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATTTTCTTAAAT

Flanking Amino Acid:

YSKEKRQRTRRFGREPHWFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.5

33.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

86.8

0.83

0.6

85.6

21.5

Minor 5ss

40.8

-1

49.9

40.8

Minor BPS

80.3

1.03

1.2

91.56

30.6

Associated Gene:

Gene:

C11orf1

Ensembl Gene ID:

ENSAPLG00000004708

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004842

7684492 - 7685955

1464