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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7690820_7691371_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7690820 - 7691371

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAGGCGGC

5'SS Class:

weak_major

3'SS Sequence:

TTCTTTGTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

ATATTTGTATTC

Flanking Amino Acid:

PRSEAEEARLEPPGSKAGQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

49.5

41.2

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

73.3

0.52

69.1

41.8

Minor 5ss

36.6

-1.5

3.6

45.3

44.3

Minor BPS

44.7

-0.4

2.1

56.33

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310