Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_7691842_7692614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7691842 - 7692614

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAG

5'SS Class:

strong_major

3'SS Sequence:

ATACATCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTGTTCTGATTT

Flanking Amino Acid:

FHARVLQTNKVLVFYFLRCF

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

71.2

40.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

64.3

0.32

0.9

55.3

40.2

Minor 5ss

32.9

-1.9

40.4

45.7

Minor BPS

57.2

0.3

1.7

76.09

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310

ENSAPLT00000004411

7690089 - 7712970

22882