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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7695210_7695350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7695210 - 7695350

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CACTCTACAAAT

Flanking Amino Acid:

WCVVSLILFLVPLVVVDSYY

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

71.5

38.5

Major BPS

71.2

0.53

70.3

31.9

Major PPT

86.6

0.82

0.7

84.6

30.4

Minor 5ss

35.6

-1.6

2.9

43.1

37.8

Minor BPS

45.1

-0.2

1.9

59.51

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310

ENSAPLT00000004411

7690089 - 7712970

22882