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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7700287_7701965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7700287 - 7701965

Intron Length:

1679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTATTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GAGTGTGTATTT

Flanking Amino Acid:

LMECLLQKFHVQNLGRPYWL

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.9

31.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

82.2

0.72

0.9

73.7

41.5

Minor 5ss

27.7

-2.6

29.3

Minor BPS

38.8

-0.7

2.3

52.85

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310

ENSAPLT00000004411

7690089 - 7712970

22882