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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7702121_7704062_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7702121 - 7704062

Intron Length:

1942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

TTGTCGTCAATT

Flanking Amino Acid:

CSAVALSALQKCYHFVFQRY

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

0.3

1.4

71.9

Major PPT

88.7

0.87

0.6

21.8

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

56.5

0.28

2.2

79.94

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310

ENSAPLT00000004411

7690089 - 7712970

22882