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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7705085_7705393_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7705085 - 7705393

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GCTTTCTGACGC

Flanking Amino Acid:

RFPSSFLLPENWQLQFILSE

Intron Amino Acid Position:

509

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

82.5

0.73

0.8

77.2

31.6

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

45.5

-0.3

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039046

7690707 - 7713016

22310

ENSAPLT00000004411

7690089 - 7712970

22882