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Intron Name: Anas_platyrhynchos_platyrhynchos_25_7705524_7711767_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7705524 - 7711767

Intron Length:

6244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGGATG

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

CTTTCTACAAGA

Flanking Amino Acid:

DQNKEEPSRYIDISKCHYLV

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.3

73.4

43.3

Major BPS

0.27

1.1

69.2

36.3

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

37.3

-1.4

3.3

41.4

Minor BPS

47.3

-0.2

2.1

64.11

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004411

7690089 - 7712970

22882

ENSAPLT00000039046

7690707 - 7713016

22310