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Intron Name: Anas_platyrhynchos_platyrhynchos_25_77177_80851_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77177 - 80851

Intron Length:

3675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

AAGACATAAACT

Flanking Amino Acid:

DCVAGPELLQDPASPAETME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

72.5

0.56

1.1

63.4

Major PPT

92.5

0.96

0.7

88.4

28.6

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

48.5

-0

65.87

Associated Gene:

Gene:

HYLS1

Ensembl Gene ID:

ENSAPLG00000000881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030555

76046 - 80933

4888

ENSAPLT00000000858

76046 - 80933

4888