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Intron Name: Anas_platyrhynchos_platyrhynchos_25_77177_81589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

77177 - 81589

Intron Length:

4413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCGGAC

5'SS Class:

major

3'SS Sequence:

TTTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

AAGACATAAACT

Flanking Amino Acid:

ARGREQLGGGRIQPAQQKPW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.2

60.1

39.2

Major BPS

72.5

0.56

1.1

63.4

Major PPT

92.5

0.96

0.7

88.4

28.6

Minor 5ss

41.1

-1

3.5

57.8

47.2

Minor BPS

48.5

-0

65.87

Associated Gene:

Gene:

HYLS1

Ensembl Gene ID:

ENSAPLG00000000881

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024842

76046 - 81705

5660