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Intron Name: Anas_platyrhynchos_platyrhynchos_25_77641_78189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

77641 - 78189

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAA

U12 Branch Point Sequence:

AAGGCAGAAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

85.3

32.2

Major BPS

49.2

-0

0.9

54.9

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

38.8

-1.3

52.9

44.3

Minor BPS

38.4

-0.8

2.3

47.67

42.4

Associated Gene:

Gene:

PUS3

Ensembl Gene ID:

ENSAPLG00000013285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013828

77557 - 81316

3760