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Intron Name: Anas_platyrhynchos_platyrhynchos_25_82227_82777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82227 - 82777

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

GTGGGTTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

CTGCCCTTATTG

Flanking Amino Acid:

LNKPNGLPVHGGPGIKNCIT

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

65.4

0.35

1.1

58.3

46.5

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

53.3

-0

1.7

56.35

45.5

Associated Gene:

Gene:

RPUSD4

Ensembl Gene ID:

ENSAPLG00000013250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031692

81778 - 84242

2465

ENSAPLT00000013799

81823 - 89214

7392