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Intron Name: Anas_platyrhynchos_platyrhynchos_25_82980_83212_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82980 - 83212

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAATG

5'SS Class:

major

3'SS Sequence:

TTTCCCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAGAC

U12 Branch Point Sequence:

TTTCCCTCCACA

Flanking Amino Acid:

FKTRQVEKIYWAISVGHPDP

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

68.2

42.8

Major BPS

47.6

-0.1

0.9

29.1

Major PPT

81.8

0.72

0.7

76.5

25.7

Minor 5ss

35.8

-1.6

3.3

45.5

43.8

Minor BPS

59.9

0.31

77.44

39.2

Associated Gene:

Gene:

RPUSD4

Ensembl Gene ID:

ENSAPLG00000013250

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031692

81778 - 84242

2465

ENSAPLT00000013799

81823 - 89214

7392