Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_25_998458_998708_F

Intron Information:

Intron Rank:

123756

Intron Class:

major

Intron Phase:

Intron Coordinates:

998458 - 998708

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTACTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTATTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

80.1

0.68

0.8

74.3

35.2

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

0.52

1.8

84.41

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044585

998146 - 999946

1801